Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951059.1_cds_XP_016491252.1_81583
CDS Infomation

[gene=LOC107810931] [db_xref=GeneID:107810931] [protein=ATP-dependent 6-phosphofructokinase 4, chloroplastic-like] [protein_id=XP_016491252.1] [location=join(13846..14136,14804..14850,15159..15198,15291..15353,15428..15565,16314..16472,16600..16653,16752..16820,19048..19177,19282..19322,20853..21077,21644..21692,22784..22938,23675..23842)] [gbkey=CDS]
Sequence

ATGGAACTCTCTTTCTGCAACGCTTCATCACTTCGTTTTCCTCACACTGATTCTGTTCCA
CTCCATTACTGCTCAATACCTGAATCCTTTCACACTTTTTCAAACTCATATTTGGCATCA
AAATCCATTTCTCTACGGAGACCGTTGATTTGGCCGCAACCTCGTTTAGTTAGACTCAGA
GCTGAAAGTGTAAGCCCTACCGAGAGCAATGGCAGTGTTGATAAACATGTCGATGACGAT
TTTATCATAGAGGATGTTCCTCACTTAACCGACTTTCTCCCTGATTTACCGTCATATCCA
AATCCATTAAAAAGGAGCCAAGCTTATGCTATTGTCAAGGAAACTTTTGTTAATCCAGAA
GATGTGGTGGCAAAAGATATCATTGTTCAGAAGGACAGCCCCAGAGGAGTACATTTTCGG
CGTGCAGGACCTCGAGAAAAGGTTTTCTTTACACCAGAAGAAGTCCGTGCTTGTATTGTG
ACATGTGGTGGTTTATGCCCAGGAATCAATACAGTGATTCGTGAAATTGTATGTGGCTTA
AAGAATATGTATGGAGTTGATGATGTAATTGGAATTCAGGGAGGTTACAGAGGATTCTAC
TCAAAAAATACCCTGGACTTGACAACAAAAGTTGTCACTGATATTCATAAACGTGGTGGC
ACTTTTCTTCAAACATCGAGAGGAGGTCATGATACTAAAAAGATTGTTGACAACATTCAA
GACCGTGGAATAAATCAGGTATACATAATTGGAGGGGATGGAACTCAAAAAGGGGCTGCT
GCAATCCACAAGGAAGTTGAAAAACGTGGTATTAAAGTAGCTGTTGCTGGGATTCCCAAG
ACAATTGATAATGATATCGCGGTGATAGACAAATCTTTTGGCTTTGATACTGCGGTTGAG
GAAGCTCAGAGGGCCATTAATGCTGCACATGTAGAGGCAGAAAGCATGGAGAATGGAGTT
GGTATAGTAAAGCTTATGGGAAGATACAGCGGATTCATTGCAATGCTTGCAACTTTGGGT
AACCGTGATGTGGACTGTTGCTTGATCCCAGAGTCCCCATTTTTCTTAGAAGGTCCAGGC
GGGCTCTATGAATATGTGGAACAGCGGCTCAAAGAGAATGGGCATGTGTTAATTGTATTG
GCAGAAGGTGCTGGGCAGGAATATGTTGCTCAAAGTATGCAAGCATTTCAAGAGAAAGAT
GCATCAGGAAACAGGCTACTCTTAGATGTCGGTCTTTGGTTAACACAACATATTAAGGAT
CATTTCACAAATATCCGGAAGATGACAATAAATATGAAATACATAGACCCTACTTACATG
ATTCGAGCGATTCCAAGCAACGCATCAGATAACATCTACTGTACACTTCTTGCACAAAGT
GCTGTCCATGGAGCGATGGCTGGATTCACAGGCTTCACTGTTGGACCTGTAAACAGCAGA
CATGCTTATATTCCAATTGACCGTGTTACTGAGACTACAAACACTGTGAACTTGACAGGC
AGAATGTGGGCACGCCTTCTAGCCTCTACTAATCAACCTAGTTTCATTCAAGACTCTCAG
GCTGTGAGAGAAAGAGTTGATAAACAGACTATTGATGCAATTCACAATATGATCATTAAC
TCTACATAG

Peptide Sequence

PEP ID

XP_016491252.1
PEP Infomation

PREDICTED: ATP-dependent 6-phosphofructokinase 4, chloroplastic-like [Nicotiana tabacum]
Sequence

MELSFCNASSLRFPHTDSVPLHYCSIPESFHTFSNSYLASKSISLRRPLIWPQPRLVRLR
AESVSPTESNGSVDKHVDDDFIIEDVPHLTDFLPDLPSYPNPLKRSQAYAIVKETFVNPE
DVVAKDIIVQKDSPRGVHFRRAGPREKVFFTPEEVRACIVTCGGLCPGINTVIREIVCGL
KNMYGVDDVIGIQGGYRGFYSKNTLDLTTKVVTDIHKRGGTFLQTSRGGHDTKKIVDNIQ
DRGINQVYIIGGDGTQKGAAAIHKEVEKRGIKVAVAGIPKTIDNDIAVIDKSFGFDTAVE
EAQRAINAAHVEAESMENGVGIVKLMGRYSGFIAMLATLGNRDVDCCLIPESPFFLEGPG
GLYEYVEQRLKENGHVLIVLAEGAGQEYVAQSMQAFQEKDASGNRLLLDVGLWLTQHIKD
HFTNIRKMTINMKYIDPTYMIRAIPSNASDNIYCTLLAQSAVHGAMAGFTGFTVGPVNSR
HAYIPIDRVTETTNTVNLTGRMWARLLASTNQPSFIQDSQAVRERVDKQTIDAIHNMIIN
ST

Transcript Sequence

Gene sequence data has not been registered.